STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB85684.1TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: FMN-binding domain protein; KEGG: aoe:Clos_0273 FMN-binding domain protein. (169 aa)    
Predicted Functional Partners:
ACB85683.1
TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: sth:STH714 hypothetical protein.
       0.590
ACB85573.1
PFAM: FMN-binding domain protein; KEGG: aoe:Clos_2103 FMN-binding domain protein.
  
     0.538
ACB85685.1
PFAM: DNA methylase N-4/N-6 domain protein; KEGG: mhu:Mhun_0884 DNA methylase N-4/N-6; Belongs to the N(4)/N(6)-methyltransferase family.
       0.474
ACB85682.1
PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: amt:Amet_1491 protein of unknown function DUF405.
       0.459
ACB85135.1
PFAM: nitroreductase; KEGG: amt:Amet_2826 nitroreductase.
  
     0.456
ACB85681.1
TIGRFAM: methyltransferase FkbM family; KEGG: fjo:Fjoh_0324 methyltransferase FkbM family.
       0.416
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.