STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB85704.1PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mta:Moth_2263 metal dependent phosphohydrolase. (369 aa)    
Predicted Functional Partners:
ACB85544.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: noc:Noc_0847 two component diguanylate cyclase.
 
   
 0.816
ACB85878.1
Diguanylate cyclase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: tpd:Teth39_0330 diguanylate cyclase with GAF sensor.
 
 0.767
ACB85703.1
DNA polymerase III, epsilon subunit; KEGG: cbh:CLC_1358 helicase, UvrD/REP/exonuclease family protein; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: UvrD/REP helicase; Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease.
       0.492
ACB84371.1
TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: mmw:Mmwyl1_0187 diguanylate cyclase with PAS/PAC sensor.
   
 0.471
ACB85926.1
KEGG: bha:BH2473 flagellar biosynthesis.
 
     0.427
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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