STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB85893.1PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: aoe:Clos_2639 polysaccharide biosynthesis protein. (534 aa)    
Predicted Functional Partners:
ACB85894.1
KEGG: bth:BT_2691 methenyltetrahydrofolate cyclohydrolase.
       0.773
ACB85351.1
PFAM: protein of unknown function DUF965; KEGG: aoe:Clos_1665 protein of unknown function DUF965; Belongs to the UPF0297 family.
  
     0.704
ACB83775.1
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-H factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mta:Moth_2479 RNA polymerase factor sigma-70.
  
    0.628
ACB84950.1
Putative helix-turn-helix protein YlxM/p13 family protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.
  
     0.623
ACB84799.1
PFAM: protein of unknown function DUF633; KEGG: tex:Teth514_1316 protein of unknown function DUF633.
  
     0.554
polC
DNA polymerase III, alpha subunit; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
    0.545
whiA
Protein of unknown function DUF199; Involved in cell division and chromosome segregation.
  
     0.495
ACB86464.1
PFAM: protein of unknown function DUF951; KEGG: cac:CAC3725 uncharacterized protein, homolog of Streptococcus pneumoniae (gi:2109447).
  
     0.483
ACB84901.1
PFAM: RNA-binding S4 domain protein; KEGG: aoe:Clos_1410 RNA-binding S4 domain protein.
  
     0.478
ACB84527.1
GHMP kinase; KEGG: mta:Moth_1103 GHMP kinase.
  
     0.439
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.