STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB85976.1PFAM: copper amine oxidase domain protein; KEGG: tva:TVAG_025170 fimbriae-associated protein, putative Pfam: MpPF2 PROSITE: ASP_RICH GLU_RICH VAL_RICH. (763 aa)    
Predicted Functional Partners:
ACB83963.1
PFAM: copper amine oxidase domain protein; KEGG: sth:STH1756 hypothetical protein.
  
     0.775
ACB85664.1
PFAM: copper amine oxidase domain protein; KEGG: hmo:HM1_2683 peptidyl-prolyl cis-trans isomerase, cyclophilin-type.
  
     0.775
ACB86247.1
PFAM: S-layer domain protein; KEGG: mta:Moth_1459 Ig-like, group 2.
  
     0.773
ACB86119.1
KEGG: amt:Amet_1492 hypothetical protein.
  
     0.770
ACB85952.1
KEGG: aoe:Clos_2272 conserved hypothetical protein.
  
     0.769
ACB86209.1
KEGG: amt:Amet_3565 hypothetical protein.
  
     0.769
ACB85944.1
PFAM: polysaccharide pyruvyl transferase; KEGG: swo:Swol_0123 polysaccharide pyruvyl transferase.
 
     0.768
ACB85819.1
PFAM: S-layer domain protein; KEGG: amt:Amet_1492 hypothetical protein.
  
     0.750
ACB86064.1
PFAM: O-antigen polymerase; KEGG: swo:Swol_0127 hypothetical protein.
  
     0.736
ACB85818.1
Hypothetical protein; KEGG: cth:Cthe_2168 propeptide, PepSY amd peptidase M4.
  
     0.734
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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