STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB86034.1TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: amt:Amet_0524 cobalt transport protein. (248 aa)    
Predicted Functional Partners:
ACB86037.1
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: amt:Amet_0523 cobalt transport protein CbiM.
 
 0.997
ACB86035.1
ABC transporter related; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 0.994
ACB85499.1
PFAM: cobalt transport protein; KEGG: amt:Amet_1652 cobalt transport protein.
  
  
  0.971
ACB85500.1
KEGG: amt:Amet_1651 ABC-type Co2+ transport system permease component-like protein.
 
 0.956
ACB85498.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: amt:Amet_1653 ABC transporter related.
 
 0.933
ACB86334.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: bha:BH0351 oligopeptide ABC transporter (ATP-binding protein); TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
 
 0.731
ACB83681.1
KEGG: aoe:Clos_0445 membrane protein.
   
 
 0.686
ACB86410.1
KEGG: wsu:WS0137 NCAIR mutase (PurE)-related protein.
 
    0.666
ACB86412.1
PFAM: ExsB family protein; KEGG: chy:CHY_1281 conserved hypothetical protein TIGR00268.
 
    0.635
ecfA
ABC transporter related; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 
 0.610
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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