STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB86105.1KEGG: aoe:Clos_2608 hypothetical protein. (174 aa)    
Predicted Functional Partners:
ACB86104.1
KEGG: cno:NT01CX_0746 hypothetical protein.
       0.697
ACB86103.1
PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: cno:NT01CX_2157 N-acetylmuramoyl-L-alanine amidase CwlL precursor (cellwall hydrolase) (autolysin).
       0.587
ACB86106.1
KEGG: mta:Moth_1792 hypothetical protein.
       0.572
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.