STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB86144.1Transcriptional repressor, CopY family; PFAM: Penicillinase repressor; KEGG: ckl:CKL_2236 transcriptional regulator. (169 aa)    
Predicted Functional Partners:
ACB86143.1
Peptidase M56 BlaR1; PFAM: leucine-rich repeat protein; peptidase M56 BlaR1; KEGG: ckl:CKL_2235 predicted regulatory protein.
 
 
 0.997
ACB84681.1
TIGRFAM: copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; KEGG: bsu:BSU33510 hypothetical protein.
  
  
 0.726
ACB85838.1
KEGG: ctc:CTC00422 hypothetical protein.
  
     0.525
ACB84655.1
KEGG: mta:Moth_0065 hypothetical protein.
  
  
 0.500
ACB84193.1
PFAM: VanW family protein; KEGG: amt:Amet_1426 VanW family protein.
  
     0.473
ACB85707.1
PFAM: DNA mismatch repair protein MutS domain protein; KEGG: amt:Amet_4672 DNA mismatch repair protein MutS domain protein.
  
     0.440
rny
Metal dependent phosphohydrolase; Endoribonuclease that initiates mRNA decay.
      
 0.430
ACB85837.1
KEGG: cbh:CLC_3354 hypothetical protein.
  
     0.413
ACB86142.1
PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: drm:Dred_2829 transposase IS116/IS110/IS902 family protein.
       0.413
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.