STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB86222.1Fumarase; PFAM: fumarate lyase; KEGG: bha:BH1426 aspartate ammonia-lyase. (479 aa)    
Predicted Functional Partners:
ACB86205.1
TIGRFAM: L-asparaginase, type I; PFAM: Asparaginase/glutaminase; KEGG: bat:BAS2916 L-asparaginase.
 
 
 0.971
ACB84224.1
TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: bca:BCE_0308 aspartate racemase; Belongs to the aspartate/glutamate racemases family.
   
 0.947
ACB85979.1
L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: bcy:Bcer98_3145 L-aspartate oxidase.
 
   
 0.936
argH
TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: drm:Dred_0278 argininosuccinate lyase.
     
0.908
ACB85416.1
PFAM: aminotransferase class I and II; KEGG: cth:Cthe_0755 aspartate aminotransferase.
     
 0.908
ACB84051.1
TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: bha:BH0625 adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
0.905
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
 0.905
pckA
Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
   
 
 0.901
ACB84040.1
Asparagine synthase; PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: tex:Teth514_2106 asparagine synthase (glutamine-hydrolyzing).
     
  0.900
ACB84544.1
TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: bcy:Bcer98_0872 asparagine synthase (glutamine-hydrolyzing).
     
  0.900
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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