STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB86292.1PAS modulated sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: tte:TTE0550 NtrC family transcriptional regulator, ATPase domain. (471 aa)    
Predicted Functional Partners:
ACB83851.1
PFAM: response regulator receiver; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: aoe:Clos_1079 two component, sigma54 specific, transcriptional regulator, Fis family.
 
      0.900
ACB85587.1
TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: pth:PTH_2724 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog.
 
   
 0.783
ACB86291.1
PFAM: alpha/beta hydrolase fold; KEGG: pmo:Pmob_0519 alpha/beta hydrolase fold.
       0.773
ACB86288.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH800 branched-chain amino acid ABC transporter ATP-binding protein.
       0.701
ACB86289.1
PFAM: inner-membrane translocator; KEGG: sth:STH801 branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.701
ACB86290.1
PFAM: inner-membrane translocator; KEGG: sth:STH802 branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.701
ACB84424.1
KEGG: amt:Amet_4067 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; hydrogenase large subunit domain protein; Fe-S cluster domain protein; SMART: PAS domain containing protein.
 
      0.536
ACB85473.1
KEGG: pgi:PG1069 alcohol dehydrogenase, zinc-containing, putative.
 
 
    0.498
ACB85455.1
KEGG: pgi:PG1069 alcohol dehydrogenase, zinc-containing, putative.
 
 
    0.491
ACB86293.1
3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.487
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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