STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB86454.1PFAM: sodium/glutamate symporter; KEGG: mbu:Mbur_1785 sodium/glutamate symporter. (470 aa)    
Predicted Functional Partners:
ACB83944.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: aeh:Mlg_1916 protein of unknown function DUF6, transmembrane.
  
     0.584
ACB83663.1
AbgT putative transporter; PFAM: C4-dicarboxylate anaerobic carrier; AbgT putative transporter; short chain fatty acid transporter; KEGG: amt:Amet_0146 AbgT putative transporter.
  
     0.514
ACB83919.1
PFAM: regulatory protein TetR; KEGG: amt:Amet_1502 transcriptional regulator, TetR family.
  
    0.434
ACB85694.1
TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: cpf:CPF_1874 cation efflux family protein.
  
     0.403
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
Server load: low (24%) [HD]