STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB86468.1TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256; KEGG: bsu:BSU40950 hypothetical protein. (199 aa)    
Predicted Functional Partners:
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.840
ACB85338.1
PFAM: nucleoside recognition domain protein; KEGG: drm:Dred_2080 nucleoside recognition domain protein.
  
    0.765
ACB85283.1
TIGRFAM: stage III sporulation protein AE; PFAM: Sporulation stage III protein AE; KEGG: drm:Dred_1060 hypothetical protein.
  
     0.764
ACB85284.1
TIGRFAM: stage III sporulation protein AD; PFAM: Sporulation stage III protein AD; KEGG: hmo:HM1_0277 stage III sporulation protein ad, putative.
  
     0.757
ACB84933.1
TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein; KEGG: pth:PTH_1749 hypothetical protein.
  
    0.749
ACB85281.1
KEGG: bcy:Bcer98_2881 sporulation stage III protein AG.
  
     0.749
ACB83677.1
KEGG: amt:Amet_0173 sporulation stage II, protein E; TIGRFAM: stage II sporulation protein E; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein.
  
     0.734
ACB86383.1
TIGRFAM: sporulation transcriptional regulator SpoIIID; KEGG: hmo:HM1_1113 stage III sporulation protein D.
  
     0.730
ACB83667.1
TIGRFAM: transcriptional regulator, AbrB family; stage V sporulation protein T; PFAM: GAF domain protein; SpoVT/AbrB domain protein; KEGG: pth:PTH_0119 regulators of stationary/sporulation gene expression.
  
  
 0.729
ACB85286.1
KEGG: bcy:Bcer98_2886 sporulation stage III protein AB.
  
     0.722
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.