Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| A0A1D6I646 | GRF1 | A0A1D6I646 | A0A060D764 | Asceapen1. | Growth-regulating factor 1; Transcription activator that plays a role in the regulation of cell expansion in developing leaves. Component of a network formed by the microRNA396 (miRNA396), the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function and the transition between cell division and cell expansion in growing leaves. | 0.499 |
| A0A1D6I646 | MUS1 | A0A1D6I646 | Q9XGC9 | Asceapen1. | DNA mismatch repair protein MSH2; Involved in postreplication mismatch repair. Binds specifically to DNA containing mismatched nucleotides thus providing a target for the excision repair processes characteristic of postreplication mismatch repair (By similarity). | 0.660 |
| A0A1D6I646 | TE1 | A0A1D6I646 | O65001 | Asceapen1. | Protein terminal ear1; Probable RNA-binding protein. Involved in the regulation of leaf initiation rate and shoot development. Seems to act more predominantly in the early stages of the leaf development, rather than in the later phase. | 0.499 |
| A0A1D6I646 | Yab10 | A0A1D6I646 | Q7X9M6 | Asceapen1. | C2C2-YABBY-transcription factor 12. | 0.661 |
| A0A1D6I646 | expB8 | A0A1D6I646 | Q94KS6 | Asceapen1. | Beta-expansin 1a; Belongs to the expansin family. | 0.552 |
| A0A1D6L3E7 | GRF1 | A0A1D6L3E7 | A0A060D764 | Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. | Growth-regulating factor 1; Transcription activator that plays a role in the regulation of cell expansion in developing leaves. Component of a network formed by the microRNA396 (miRNA396), the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function and the transition between cell division and cell expansion in growing leaves. | 0.430 |
| A0A1D6M217 | Cl3114_1(600) | A0A1D6M217 | A0A1D6M236 | Serine/threonine-protein kinase TOR. | Serine/threonine-protein kinase TOR. | 0.944 |
| A0A1D6M217 | GRF1 | A0A1D6M217 | A0A060D764 | Serine/threonine-protein kinase TOR. | Growth-regulating factor 1; Transcription activator that plays a role in the regulation of cell expansion in developing leaves. Component of a network formed by the microRNA396 (miRNA396), the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function and the transition between cell division and cell expansion in growing leaves. | 0.430 |
| Cl3114_1(600) | A0A1D6M217 | A0A1D6M236 | A0A1D6M217 | Serine/threonine-protein kinase TOR. | Serine/threonine-protein kinase TOR. | 0.944 |
| Cl3114_1(600) | GRF1 | A0A1D6M236 | A0A060D764 | Serine/threonine-protein kinase TOR. | Growth-regulating factor 1; Transcription activator that plays a role in the regulation of cell expansion in developing leaves. Component of a network formed by the microRNA396 (miRNA396), the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function and the transition between cell division and cell expansion in growing leaves. | 0.430 |
| GIF2 | GRF1 | A5HEH5 | A0A060D764 | Growth-regulating-factor-inteacting factor2. | Growth-regulating factor 1; Transcription activator that plays a role in the regulation of cell expansion in developing leaves. Component of a network formed by the microRNA396 (miRNA396), the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function and the transition between cell division and cell expansion in growing leaves. | 0.660 |
| GRF1 | A0A1D6I646 | A0A060D764 | A0A1D6I646 | Growth-regulating factor 1; Transcription activator that plays a role in the regulation of cell expansion in developing leaves. Component of a network formed by the microRNA396 (miRNA396), the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function and the transition between cell division and cell expansion in growing leaves. | Asceapen1. | 0.499 |
| GRF1 | A0A1D6L3E7 | A0A060D764 | A0A1D6L3E7 | Growth-regulating factor 1; Transcription activator that plays a role in the regulation of cell expansion in developing leaves. Component of a network formed by the microRNA396 (miRNA396), the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function and the transition between cell division and cell expansion in growing leaves. | Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. | 0.430 |
| GRF1 | A0A1D6M217 | A0A060D764 | A0A1D6M217 | Growth-regulating factor 1; Transcription activator that plays a role in the regulation of cell expansion in developing leaves. Component of a network formed by the microRNA396 (miRNA396), the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function and the transition between cell division and cell expansion in growing leaves. | Serine/threonine-protein kinase TOR. | 0.430 |
| GRF1 | Cl3114_1(600) | A0A060D764 | A0A1D6M236 | Growth-regulating factor 1; Transcription activator that plays a role in the regulation of cell expansion in developing leaves. Component of a network formed by the microRNA396 (miRNA396), the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function and the transition between cell division and cell expansion in growing leaves. | Serine/threonine-protein kinase TOR. | 0.430 |
| GRF1 | GIF2 | A0A060D764 | A5HEH5 | Growth-regulating factor 1; Transcription activator that plays a role in the regulation of cell expansion in developing leaves. Component of a network formed by the microRNA396 (miRNA396), the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function and the transition between cell division and cell expansion in growing leaves. | Growth-regulating-factor-inteacting factor2. | 0.660 |
| GRF1 | GRF1-3 | A0A060D764 | P49106 | Growth-regulating factor 1; Transcription activator that plays a role in the regulation of cell expansion in developing leaves. Component of a network formed by the microRNA396 (miRNA396), the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function and the transition between cell division and cell expansion in growing leaves. | 14-3-3-like protein GF14-6; Is associated with a DNA binding complex to bind to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes. | 0.741 |
| GRF1 | MUS1 | A0A060D764 | Q9XGC9 | Growth-regulating factor 1; Transcription activator that plays a role in the regulation of cell expansion in developing leaves. Component of a network formed by the microRNA396 (miRNA396), the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function and the transition between cell division and cell expansion in growing leaves. | DNA mismatch repair protein MSH2; Involved in postreplication mismatch repair. Binds specifically to DNA containing mismatched nucleotides thus providing a target for the excision repair processes characteristic of postreplication mismatch repair (By similarity). | 0.513 |
| GRF1 | TE1 | A0A060D764 | O65001 | Growth-regulating factor 1; Transcription activator that plays a role in the regulation of cell expansion in developing leaves. Component of a network formed by the microRNA396 (miRNA396), the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function and the transition between cell division and cell expansion in growing leaves. | Protein terminal ear1; Probable RNA-binding protein. Involved in the regulation of leaf initiation rate and shoot development. Seems to act more predominantly in the early stages of the leaf development, rather than in the later phase. | 0.665 |
| GRF1 | Yab10 | A0A060D764 | Q7X9M6 | Growth-regulating factor 1; Transcription activator that plays a role in the regulation of cell expansion in developing leaves. Component of a network formed by the microRNA396 (miRNA396), the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function and the transition between cell division and cell expansion in growing leaves. | C2C2-YABBY-transcription factor 12. | 0.778 |
page 1 of 3