STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A096QJ49Transcription factor MYB30. (302 aa)    
Predicted Functional Partners:
B4G1X5_MAIZE
Nudix hydrolase 17 mitochondrial.
   
  
 0.782
B6T9Z2_MAIZE
Nudix hydrolase 4.
      
 0.779
A0A1D6IZQ8
Acyl-CoA-binding protein1.
      
 0.778
A0A1D6F5S9
Transcription factor ICE1.
      
 0.774
A0A1D6FIA8
Ubiquitin-like-specific protease ESD4.
      
 0.667
A0A1D6GPN1
PPPDE peptidase domain-containing protein 2.
      
 0.664
Pco141631
Thioredoxin.
      
 0.664
aox2
Ubiquinol oxidase; Belongs to the alternative oxidase family.
   
  
 0.563
A0A1D6JHP9
Lysine-specific histone demethylase 1.
      
 0.551
A0A1D6MPR3
Topless-related1.
      
 0.551
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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