Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A096QLU9Heterogeneous nuclear ribonucleoprotein A3-like protein 2. (447 aa)    
Predicted Functional Partners:
SC26
Splicing factor, arginine/serine-rich 2.
  
 
 0.683
A0A1D6QK58
Serine/arginine-rich splicing factor SC35.
  
 
 0.676
A0A1D6F1Z3
Serine/arginine-rich splicing factor SC35.
  
 
0.611
A0A1D6IK73
Serine/arginine-rich splicing factor SC35.
  
 
0.611
A0A1D6GRJ3
Uncharacterized protein.
   
 0.590
SC32
Serine/arginine-rich splicing factor SC35.
  
 
 0.573
A0A1D6EWN6
Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7.
   
 
 0.563
A0A1D6K2V6
Nuclear cap-binding protein subunit 1.
    
 0.562
A0A1D6H288
Putative small nuclear ribonucleoprotein F.
   
 0.555
A0A1D6QP33
U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.
    
 0.528
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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