STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A096QRA0Loricrin-related. (629 aa)    
Predicted Functional Partners:
A0A1D6ELK2
DNA-directed RNA polymerases II IV and V subunit 3.
    
 0.908
B6SLK8_MAIZE
DNA-directed RNA polymerase II 16 kDa polypeptide.
    
 0.907
A0A1D6IU95
DNA-directed RNA polymerases II IV and V subunit 10.
    
 0.889
A0A1D6F1Z8
Transcription elongation factor SPT4.
    
 0.844
A0A1D6LVH8
Putative bZIP transcription factor superfamily protein.
    
 0.844
B4FGM1_MAIZE
DNA-directed RNA polymerases II and IV subunit 5A.
    
 0.842
Pco088367b
DNA-directed RNA polymerases II 24 kDa polypeptide.
    
 0.842
Gtc102
FACT complex subunit SPT16.
   
 0.841
TIDP3101
DNA-directed RNA polymerases IV and V subunit 4.
    
 0.841
SPT16
FACT complex subunit SPT16; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
   
 0.841
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.