STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6DSQ4CASP-like protein 1. (513 aa)    
Predicted Functional Partners:
A0A1D6NDP8
Protein BRASSINOSTEROID INSENSITIVE 1.
    
0.911
K7V4X2_MAIZE
Brassinosteroid insensitive1a.
    
0.911
A0A1D6NWT6
Putative acyl-activating enzyme 19.
  
 0.820
TIDP3561
Shaggy-related protein kinase iota; Belongs to the protein kinase superfamily.
    
 
 0.705
A0A1D6H659
Shaggy-related protein kinase eta; Belongs to the protein kinase superfamily.
    
 
 0.701
A0A1D6FVI7
Histone H2A variant 1; Belongs to the histone H2A family.
    
 
 0.694
A0A1D6KJQ2
Histone H2A variant 1; Belongs to the histone H2A family.
    
 
 0.694
A0A1D6L8S4
Ubiquitin-60S ribosomal protein L40.
    
 
 0.691
A0A1D6ENJ2
Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 0.678
A0A1D6MSX9
Glycine-rich domain-containing protein 1.
    
 0.673
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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