STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6DTN8Vacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic. (1008 aa)    
Predicted Functional Partners:
A0A1D6IY07
Zinc ion binding.
  
 
 0.965
A0A1D6J5J5
Vacuolar protein sorting-associated protein 11 homolog; Involved in regulating membrane fusion at the tonoplast and the prevacuolar compartment.
   
 0.959
A0A1D6G106
Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family.
    
 0.954
Si486029c04
Vacuolar protein-sorting protein 33; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.898
A0A1D6L259
Vacuolar sorting protein 39.
   
 0.876
A0A1D6MZZ0
SAND family protein.
    
 
 0.829
A0A1D6M2Q9
Vacuolar sorting protein 39.
   
 0.815
A0A1D6LIJ2
Formin-like protein; Belongs to the formin-like family.
   
 0.804
Csu716
Myrosinase.
    
 
 0.780
A0A1D6Q1A2
Myrosinase.
    
 
 0.780
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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