STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6DUM5Putative plastid-lipid-associated protein 13 chloroplastic. (312 aa)    
Predicted Functional Partners:
A0A1D6LS98
D-aminoacyl-tRNA deacylase.
    
 0.594
Fbn1
Fibrillin1.
   
  
 0.435
Pco102443(516)
PAP fibrillin family protein.
      
 0.424
HrBP1
Harpin binding protein 1.
      
 0.424
A0A1D6EB42
Structural molecule.
      
 0.422
A0A1D6HP97
Nucleic acid-binding OB-fold-like protein.
     
 0.419
A0A1D6GD35
Exosome complex exonuclease RRP46-like protein.
    
  0.418
B4FVR4_MAIZE
Exosome complex component RRP4-like protein.
    
 0.418
A0A1D6HXL6
mRNA-decapping enzyme subunit 2.
   
 0.417
A0A1D6LP98
mRNA-decapping enzyme subunit 2.
   
 0.417
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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