Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
Node Content
empty nodes: proteins of unknown 3D structure
filled nodes: a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6DXK4
Uncharacterized protein. (90 aa)
Predicted Functional Partners:
A0A1D6K6W3
Trehalase.
0.571
Umc2246
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
0.442
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577 Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1
node2
node1 accession
node2 accession
node1 annotation
node2 annotation
score
A0A1D6DXK4
A0A1D6K6W3
A0A1D6DXK4
A0A1D6K6W3
Uncharacterized protein.
Trehalase.
0.571
A0A1D6DXK4
Umc2246
A0A1D6DXK4
B4FR89
Uncharacterized protein.
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
0.442
A0A1D6K6W3
A0A1D6DXK4
A0A1D6K6W3
A0A1D6DXK4
Trehalase.
Uncharacterized protein.
0.571
Umc2246
A0A1D6DXK4
B4FR89
A0A1D6DXK4
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
Uncharacterized protein.
0.442
Network Stats
Network Stats analysis is still ongoing, please wait ...
Functional enrichments in your networkNote: some enrichments may be expected here (why?) disable highlightexplain columns
Enrichment analysis is still ongoing, please wait ...
Statistical background
For the above enrichment analysis, the following statistical background is assumed: