STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6E0P7GPCR-type G protein 2. (119 aa)    
Predicted Functional Partners:
B4FD90_MAIZE
40S ribosomal protein S19-3.
      
 0.860
B4FP25_MAIZE
40S ribosomal protein S19-3.
      
 0.860
A0A1D6ND81
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
      
 0.858
A0A1D6E090
DNA ligase.
      
 0.779
B4FUK9_MAIZE
COP9 signalosome complex subunit 5b.
      
 0.779
Pco095943
Glycerol kinase.
      
 0.775
B4FUK2_MAIZE
Peptidylprolyl isomerase.
      
 0.759
B4FSP7_MAIZE
Phosphatidylinositolglycan synthase family protein.
      
 0.754
B4FF88_MAIZE
Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
      
 0.665
A0A1D6N5L5
Extradiol ring-cleavage dioxygenase.
      
 0.660
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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