Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A1D6E090 | A0A1D6E0P7 | A0A1D6E090 | A0A1D6E0P7 | DNA ligase. | GPCR-type G protein 2. | 0.779 |
A0A1D6E090 | A0A1D6N5L5 | A0A1D6E090 | A0A1D6N5L5 | DNA ligase. | Extradiol ring-cleavage dioxygenase. | 0.445 |
A0A1D6E090 | A0A1D6ND81 | A0A1D6E090 | A0A1D6ND81 | DNA ligase. | Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. | 0.906 |
A0A1D6E090 | B4FD90_MAIZE | A0A1D6E090 | B4FD90 | DNA ligase. | 40S ribosomal protein S19-3. | 0.790 |
A0A1D6E090 | B4FF88_MAIZE | A0A1D6E090 | B4FF88 | DNA ligase. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.757 |
A0A1D6E090 | B4FP25_MAIZE | A0A1D6E090 | B4FP25 | DNA ligase. | 40S ribosomal protein S19-3. | 0.790 |
A0A1D6E090 | B4FSP7_MAIZE | A0A1D6E090 | B4FSP7 | DNA ligase. | Phosphatidylinositolglycan synthase family protein. | 0.674 |
A0A1D6E090 | B4FUK2_MAIZE | A0A1D6E090 | B4FUK2 | DNA ligase. | Peptidylprolyl isomerase. | 0.661 |
A0A1D6E090 | B4FUK9_MAIZE | A0A1D6E090 | B4FUK9 | DNA ligase. | COP9 signalosome complex subunit 5b. | 0.851 |
A0A1D6E090 | Pco095943 | A0A1D6E090 | B6TZ71 | DNA ligase. | Glycerol kinase. | 0.680 |
A0A1D6E0P7 | A0A1D6E090 | A0A1D6E0P7 | A0A1D6E090 | GPCR-type G protein 2. | DNA ligase. | 0.779 |
A0A1D6E0P7 | A0A1D6N5L5 | A0A1D6E0P7 | A0A1D6N5L5 | GPCR-type G protein 2. | Extradiol ring-cleavage dioxygenase. | 0.660 |
A0A1D6E0P7 | A0A1D6ND81 | A0A1D6E0P7 | A0A1D6ND81 | GPCR-type G protein 2. | Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. | 0.858 |
A0A1D6E0P7 | B4FD90_MAIZE | A0A1D6E0P7 | B4FD90 | GPCR-type G protein 2. | 40S ribosomal protein S19-3. | 0.860 |
A0A1D6E0P7 | B4FF88_MAIZE | A0A1D6E0P7 | B4FF88 | GPCR-type G protein 2. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.665 |
A0A1D6E0P7 | B4FP25_MAIZE | A0A1D6E0P7 | B4FP25 | GPCR-type G protein 2. | 40S ribosomal protein S19-3. | 0.860 |
A0A1D6E0P7 | B4FSP7_MAIZE | A0A1D6E0P7 | B4FSP7 | GPCR-type G protein 2. | Phosphatidylinositolglycan synthase family protein. | 0.754 |
A0A1D6E0P7 | B4FUK2_MAIZE | A0A1D6E0P7 | B4FUK2 | GPCR-type G protein 2. | Peptidylprolyl isomerase. | 0.759 |
A0A1D6E0P7 | B4FUK9_MAIZE | A0A1D6E0P7 | B4FUK9 | GPCR-type G protein 2. | COP9 signalosome complex subunit 5b. | 0.779 |
A0A1D6E0P7 | Pco095943 | A0A1D6E0P7 | B6TZ71 | GPCR-type G protein 2. | Glycerol kinase. | 0.775 |
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