STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6E1P4Sirohydrochlorin ferrochelatase chloroplastic. (212 aa)    
Predicted Functional Partners:
Sum1
Siroheme uroporphyrinogen methyltransferase1; Belongs to the precorrin methyltransferase family.
  
 
 0.970
K7VJV9_MAIZE
Urophorphyrin methylase 1; Belongs to the precorrin methyltransferase family.
  
 
 0.970
Cl18269_1
Tetratricopeptide repeat (TPR)-like superfamily protein.
  
 
 0.899
A0A1D6N6Y3
Tetratricopeptide repeat (TPR)-like superfamily protein.
  
 
 0.899
Prpo2
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
     
 0.792
Prpo1
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
     
 0.792
A0A1D6MR94
Protoporphyrinogen oxidase 1 chloroplastic.
     
 0.792
B4FAW7_MAIZE
Histidinol-phosphate aminotransferase 2 chloroplastic.
     
 0.738
A0A1D6GNK4
Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family.
  
 
 0.735
B4F970_MAIZE
Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family.
  
 
 0.735
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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