Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A1D6E1P4 | A0A1D6GNK4 | A0A1D6E1P4 | A0A1D6GNK4 | Sirohydrochlorin ferrochelatase chloroplastic. | Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family. | 0.735 |
A0A1D6E1P4 | A0A1D6MR94 | A0A1D6E1P4 | A0A1D6MR94 | Sirohydrochlorin ferrochelatase chloroplastic. | Protoporphyrinogen oxidase 1 chloroplastic. | 0.792 |
A0A1D6E1P4 | A0A1D6N6Y3 | A0A1D6E1P4 | A0A1D6N6Y3 | Sirohydrochlorin ferrochelatase chloroplastic. | Tetratricopeptide repeat (TPR)-like superfamily protein. | 0.899 |
A0A1D6E1P4 | B4F970_MAIZE | A0A1D6E1P4 | B4F970 | Sirohydrochlorin ferrochelatase chloroplastic. | Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family. | 0.735 |
A0A1D6E1P4 | B4FAW7_MAIZE | A0A1D6E1P4 | B4FAW7 | Sirohydrochlorin ferrochelatase chloroplastic. | Histidinol-phosphate aminotransferase 2 chloroplastic. | 0.738 |
A0A1D6E1P4 | Cl18269_1 | A0A1D6E1P4 | A0A1D6M507 | Sirohydrochlorin ferrochelatase chloroplastic. | Tetratricopeptide repeat (TPR)-like superfamily protein. | 0.899 |
A0A1D6E1P4 | K7VJV9_MAIZE | A0A1D6E1P4 | K7VJV9 | Sirohydrochlorin ferrochelatase chloroplastic. | Urophorphyrin methylase 1; Belongs to the precorrin methyltransferase family. | 0.970 |
A0A1D6E1P4 | Prpo1 | A0A1D6E1P4 | A0A1D6FAV4 | Sirohydrochlorin ferrochelatase chloroplastic. | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.792 |
A0A1D6E1P4 | Prpo2 | A0A1D6E1P4 | A0A1D6E7M3 | Sirohydrochlorin ferrochelatase chloroplastic. | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.792 |
A0A1D6E1P4 | Sum1 | A0A1D6E1P4 | B4F7W3 | Sirohydrochlorin ferrochelatase chloroplastic. | Siroheme uroporphyrinogen methyltransferase1; Belongs to the precorrin methyltransferase family. | 0.970 |
A0A1D6GNK4 | A0A1D6E1P4 | A0A1D6GNK4 | A0A1D6E1P4 | Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family. | Sirohydrochlorin ferrochelatase chloroplastic. | 0.735 |
A0A1D6GNK4 | A0A1D6MR94 | A0A1D6GNK4 | A0A1D6MR94 | Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family. | Protoporphyrinogen oxidase 1 chloroplastic. | 0.429 |
A0A1D6GNK4 | A0A1D6N6Y3 | A0A1D6GNK4 | A0A1D6N6Y3 | Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family. | Tetratricopeptide repeat (TPR)-like superfamily protein. | 0.821 |
A0A1D6GNK4 | B4FAW7_MAIZE | A0A1D6GNK4 | B4FAW7 | Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family. | Histidinol-phosphate aminotransferase 2 chloroplastic. | 0.538 |
A0A1D6GNK4 | Cl18269_1 | A0A1D6GNK4 | A0A1D6M507 | Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family. | Tetratricopeptide repeat (TPR)-like superfamily protein. | 0.821 |
A0A1D6GNK4 | K7VJV9_MAIZE | A0A1D6GNK4 | K7VJV9 | Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family. | Urophorphyrin methylase 1; Belongs to the precorrin methyltransferase family. | 0.855 |
A0A1D6GNK4 | Prpo1 | A0A1D6GNK4 | A0A1D6FAV4 | Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family. | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.703 |
A0A1D6GNK4 | Prpo2 | A0A1D6GNK4 | A0A1D6E7M3 | Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family. | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.703 |
A0A1D6GNK4 | Sum1 | A0A1D6GNK4 | B4F7W3 | Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family. | Siroheme uroporphyrinogen methyltransferase1; Belongs to the precorrin methyltransferase family. | 0.855 |
A0A1D6MR94 | A0A1D6E1P4 | A0A1D6MR94 | A0A1D6E1P4 | Protoporphyrinogen oxidase 1 chloroplastic. | Sirohydrochlorin ferrochelatase chloroplastic. | 0.792 |
page 1 of 5