STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6E2U5Protein kinase domain-containing protein. (238 aa)    
Predicted Functional Partners:
Pco103361
Cyclin-H1-1; Belongs to the cyclin family.
     
 0.620
A0A1D6ELK2
DNA-directed RNA polymerases II IV and V subunit 3.
   
 
 0.613
A0A1D6M3F6
Putative cyclin-dependent kinase family protein; Belongs to the protein kinase superfamily.
  
 
0.574
Pco075430a
CDC2+/CDC28-related protein kinase R2; Belongs to the protein kinase superfamily.
  
 
0.574
B6SLK8_MAIZE
DNA-directed RNA polymerase II 16 kDa polypeptide.
    
 0.523
A0A1D6IZD2
Uncharacterized protein.
    
  0.521
A0A1D6F1Z8
Transcription elongation factor SPT4.
    
 0.509
A0A1D6LVH8
Putative bZIP transcription factor superfamily protein.
    
 0.509
Si946076e12
RNA polymerase I subunit 43.
   
 
 0.490
A0A1D6FLI0
DNA damage-binding protein 1a.
    
 
 0.483
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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