STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6E708Enhancer of rudimentary-like protein. (97 aa)    
Predicted Functional Partners:
A0A1D6H288
Putative small nuclear ribonucleoprotein F.
   
   0.733
A0A1D6IWR3
Small nuclear ribonucleoprotein family protein.
   
    0.557
A0A1D6MFZ6
Small nuclear ribonucleoprotein family protein.
   
    0.557
B6SK95_MAIZE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
    0.557
IDP1453
Small nuclear ribonucleoprotein Sm D2.
   
   0.523
B4FFH9_MAIZE
Small nuclear ribonucleoprotein Sm D2.
   
   0.523
A0A1D6LDM1
Protein mago nashi-like protein.
   
   0.484
Pco111548
Protein mago nashi-like protein.
   
   0.484
A0A1D6JYJ3
Putative small nuclear ribonucleoprotein G.
   
    0.474
A0A1D6M207
Putative small nuclear ribonucleoprotein G.
   
    0.474
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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