STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6E8W9RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. (1148 aa)    
Predicted Functional Partners:
A0A1D6KIZ1
Required to maintain repression6.
    
 
 0.940
A0A1D6KIY2
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.916
POLB_MAIZE
Putative Pol polyprotein from transposon element Bs1; Bs1 is probably an active plant retrotransposon.
      
 0.890
Rmr7
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.868
A0A1D6MKY1
RNA helicase.
      
 0.814
A0A1D6GFC7
RNA helicase.
      
 0.800
K7TEV9_MAIZE
RNA helicase.
      
 0.800
rmr1
Required to maintain repression 1.
   
 
 0.780
A0A1D6ELK2
DNA-directed RNA polymerases II IV and V subunit 3.
    
   0.716
dcl1
Dicer-like protein 1; Belongs to the helicase family. Dicer subfamily.
    
 
 0.712
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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