Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A1D6E8W9 | A0A1D6ELK2 | A0A1D6E8W9 | A0A1D6ELK2 | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | DNA-directed RNA polymerases II IV and V subunit 3. | 0.716 |
A0A1D6E8W9 | A0A1D6GFC7 | A0A1D6E8W9 | A0A1D6GFC7 | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | RNA helicase. | 0.800 |
A0A1D6E8W9 | A0A1D6KIY2 | A0A1D6E8W9 | A0A1D6KIY2 | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.916 |
A0A1D6E8W9 | A0A1D6KIZ1 | A0A1D6E8W9 | A0A1D6KIZ1 | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | Required to maintain repression6. | 0.940 |
A0A1D6E8W9 | A0A1D6MKY1 | A0A1D6E8W9 | A0A1D6MKY1 | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | RNA helicase. | 0.814 |
A0A1D6E8W9 | K7TEV9_MAIZE | A0A1D6E8W9 | K7TEV9 | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | RNA helicase. | 0.800 |
A0A1D6E8W9 | POLB_MAIZE | A0A1D6E8W9 | P15718 | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | Putative Pol polyprotein from transposon element Bs1; Bs1 is probably an active plant retrotransposon. | 0.890 |
A0A1D6E8W9 | Rmr7 | A0A1D6E8W9 | D2WKH8 | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.868 |
A0A1D6E8W9 | dcl1 | A0A1D6E8W9 | A0A0K1H3C4 | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | Dicer-like protein 1; Belongs to the helicase family. Dicer subfamily. | 0.712 |
A0A1D6E8W9 | rmr1 | A0A1D6E8W9 | A8I429 | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | Required to maintain repression 1. | 0.780 |
A0A1D6ELK2 | A0A1D6E8W9 | A0A1D6ELK2 | A0A1D6E8W9 | DNA-directed RNA polymerases II IV and V subunit 3. | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | 0.716 |
A0A1D6ELK2 | A0A1D6KIY2 | A0A1D6ELK2 | A0A1D6KIY2 | DNA-directed RNA polymerases II IV and V subunit 3. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.898 |
A0A1D6ELK2 | A0A1D6KIZ1 | A0A1D6ELK2 | A0A1D6KIZ1 | DNA-directed RNA polymerases II IV and V subunit 3. | Required to maintain repression6. | 0.898 |
A0A1D6ELK2 | Rmr7 | A0A1D6ELK2 | D2WKH8 | DNA-directed RNA polymerases II IV and V subunit 3. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.990 |
A0A1D6ELK2 | rmr1 | A0A1D6ELK2 | A8I429 | DNA-directed RNA polymerases II IV and V subunit 3. | Required to maintain repression 1. | 0.595 |
A0A1D6GFC7 | A0A1D6E8W9 | A0A1D6GFC7 | A0A1D6E8W9 | RNA helicase. | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | 0.800 |
A0A1D6GFC7 | A0A1D6MKY1 | A0A1D6GFC7 | A0A1D6MKY1 | RNA helicase. | RNA helicase. | 0.554 |
A0A1D6GFC7 | POLB_MAIZE | A0A1D6GFC7 | P15718 | RNA helicase. | Putative Pol polyprotein from transposon element Bs1; Bs1 is probably an active plant retrotransposon. | 0.660 |
A0A1D6KIY2 | A0A1D6E8W9 | A0A1D6KIY2 | A0A1D6E8W9 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | 0.916 |
A0A1D6KIY2 | A0A1D6ELK2 | A0A1D6KIY2 | A0A1D6ELK2 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerases II IV and V subunit 3. | 0.898 |
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