Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A1D6EAR0Protein kinase superfamily protein. (699 aa)    
Predicted Functional Partners:
A0A1D6N1K8
RNA-binding (RRM/RBD/RNP motifs) family protein.
    
 0.637
K7V1K5_MAIZE
SWR1 complex subunit 6.
      
 0.582
A0A1D6HBC7
RING/FYVE/PHD zinc finger superfamily protein.
      
 0.569
A0A1D6Q3R1
RING/FYVE/PHD zinc finger superfamily protein.
      
 0.569
A0A1D6F745
Protein phosphatase 2C family protein.
    
 0.517
A0A1D6F746
Protein phosphatase 2C family protein.
    
 0.517
A0A1D6NKN6
Peptidyl-prolyl cis-trans isomerase CYP57.
    
 0.516
Pco116717
RNA-binding (RRM/RBD/RNP motifs) family protein.
      
 0.500
A0A1D6P4M0
RNA-binding (RRM/RBD/RNP motifs) family protein.
      
 0.500
A0A1D6Q8I5
RNA-binding (RRM/RBD/RNP motifs) family protein.
      
 0.500
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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