STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6ED28Protein XRI1. (303 aa)    
Predicted Functional Partners:
B6TEM7_MAIZE
Ubiquitin-conjugating enzyme E2 7; Belongs to the ubiquitin-conjugating enzyme family.
      
 0.775
ubc7
Ubiquitin-conjugating enzyme protein E2; Belongs to the ubiquitin-conjugating enzyme family.
      
 0.775
A0A1D6FRH7
Vesicle-associated protein 2-2.
      
 0.774
A0A1D6H2Q8
BRCA1-associated protein.
      
 0.774
A0A1D6N9J3
Haloacid dehalogenase (HAD) superfamily protein.
      
 0.774
C0P9G0_MAIZE
Vesicle-associated protein 2-2.
      
 0.774
A0A1D6FRJ2
ARM repeat superfamily protein.
      
 0.760
Pco124599
Thaumatin-like protein.
      
 0.760
A0A1D6M2S2
ARM repeat superfamily protein.
      
 0.760
A0A1D6MWV6
Importin subunit beta-1.
      
 0.760
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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