STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6EEI0Transposase_23 domain-containing protein. (154 aa)    
Predicted Functional Partners:
A0A1D6IBE8
Vacuolar protein sorting-associated protein 24 homolog 1.
   
 0.881
Umc2748
Vacuolar protein sorting-associated protein 24 homolog 1.
   
 0.881
A0A1D6FE31
Vacuolar sorting protein 4b; Belongs to the AAA ATPase family.
    
 0.815
A0A1D6NWJ2
Uncharacterized protein.
    
 0.815
B8A2W9_MAIZE
Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1; Belongs to the AAA ATPase family.
    
 0.815
B4FU00_MAIZE
SNF7 family protein.
   
 0.793
Pco062079a
Charged multivesicular body protein 5.
   
 0.793
B4FJ73_MAIZE
Vacuolar protein sorting-associated protein 20 homolog 2.
   
 0.780
C0PNJ6_MAIZE
Vacuolar protein sorting-associated protein 20 homolog 2.
   
 0.780
Cl9441_1b
Vacuolar protein sorting-associated protein; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
   
 0.776
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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