STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6EFA2RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. (223 aa)    
Predicted Functional Partners:
POLB_MAIZE
Putative Pol polyprotein from transposon element Bs1; Bs1 is probably an active plant retrotransposon.
      
 0.890
A0A1D6MKY1
RNA helicase.
      
 0.836
A0A1D6GFC7
RNA helicase.
      
 0.833
K7TEV9_MAIZE
RNA helicase.
      
 0.833
Rmr7
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.784
A0A1D6KIZ1
Required to maintain repression6.
    
 
 0.783
rmr1
Required to maintain repression 1.
      
 0.775
A0A1D6KIY2
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.697
SGS3
Protein SUPPRESSOR OF GENE SILENCING 3 homolog; Required for the biogenesis of miRNAs and trans-acting siRNAs and essential for the specification of adaxial/abaxial organ polarity. May be involved in natural virus resistance (By similarity). Belongs to the SGS3 family.
    
 
 0.670
A0A1D6L4J9
DCL protein.
      
 0.667
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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