STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6EJS1Acyl-lipid omega-3 desaturase (Cytochrome b5) endoplasmic reticulum. (68 aa)    
Predicted Functional Partners:
A0A1D6N3X2
Beta-Casp domain-containing protein.
    
 0.591
A0A1D6EHL9
Embryo defective 2739.
    
 0.565
A0A1D6MNT0
ARM repeat superfamily protein.
    
 0.561
A0A1D6NJL4
Cleavage and polyadenylation specificity factor subunit 3-II.
    
 0.485
A0A1D6NYM6
Uncharacterized protein.
    
 0.485
A0A1D6EYC1
Nucleic acid-binding OB-fold-like protein.
    
  0.473
A0A1D6ELK2
DNA-directed RNA polymerases II IV and V subunit 3.
    
  0.400
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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