STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6ELI3RNA binding. (774 aa)    
Predicted Functional Partners:
C0P3D9_MAIZE
Flowering time control protein FY.
   
 
 0.670
A0A1D6I1K5
RNA recognition motif (RRM)-containing protein.
    
 
 0.625
A0A1D6I8U5
Flowering time control protein FPA.
    
 
 0.606
A0A1D6E8G4
Protein NBR1-like protein.
      
 0.596
C0PDQ4_MAIZE
Protein NBR1-like protein.
      
 0.596
A0A1D6NXS3
BTB/POZ domain-containing protein.
      
 0.515
A0A1D6FDV1
Phytochrome A.
      
 0.497
PHYA1
Phytochrome A; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose-bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reductas [...]
      
 0.497
phyA1
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
      
 0.497
A0A1D6E3G3
Flowering locus D.
      
 0.495
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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