STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6EP63Sulfite exporter TauE/SafE family protein. (495 aa)    
Predicted Functional Partners:
A0A1D6FXH3
RING/FYVE/PHD-type zinc finger family protein.
    
 0.861
A0A1D6HAL6
DDT domain-containing protein.
    
 0.861
Nfe101
DDT domain-containing protein.
    
 0.861
CADR16
DNA polymerase epsilon subunit 3.
    
 0.820
A0A1D6GQK6
Histone acetyl transferase GNAT/MYST 101.
    
 0.806
TIDP3559
Uncharacterized protein.
    
 0.806
A0A1D6FE32
Protein DAMAGED DNA-BINDING 2.
   
 0.781
Si946076e12
RNA polymerase I subunit 43.
   
 0.743
A0A1D6H7X1
High mobility group B protein 15.
   
 0.722
C0P8W9_MAIZE
High mobility group B protein 15.
   
 0.722
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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