STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6ERN5Isoamylase 3 chloroplastic. (418 aa)    
Predicted Functional Partners:
Pho1
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.992
Pco061836
4-alpha-glucanotransferase DPE2.
  
 
 0.989
sbe1
14-alpha-glucan-branching enzyme 2-2 chloroplastic/amyloplastic.
     
 0.979
A0A1D6EBQ6
Starch branching enzyme IIa.
   
 
 0.978
SBE1
1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic; Catalyzes the formation of the alpha-1,6-glucosidic linkages in starch by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.
   
 
 0.978
A0A1D6NE29
Alpha-amylase 3 chloroplastic.
  
 
 0.977
Sbe3
Starch branching enzyme III.
     
 0.977
Gpm120
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.971
A0A1D6I3N3
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.967
B4FYM6_MAIZE
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.967
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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