STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6ES07Ubiquitin-like superfamily protein. (185 aa)    
Predicted Functional Partners:
A0A1D6HDE4
E3 ubiquitin-protein ligase PRT1.
   
 0.932
A0A1D6E8G4
Protein NBR1-like protein.
   
 0.926
C0PDQ4_MAIZE
Protein NBR1-like protein.
   
 0.926
A0A1D6L8S4
Ubiquitin-60S ribosomal protein L40.
   
 0.920
B6SHW9_MAIZE
Ubiquitin-60S ribosomal protein L40-1.
   
 0.920
C0HFM4_MAIZE
60S ribosomal protein L13a-1.
   
 0.919
A0A1D6FS31
E3 ubiquitin-protein ligase UPL4.
   
 0.916
A0A1D6LGG4
E3 ubiquitin-protein ligase UPL4.
   
 0.916
A0A1D6LGX2
E3 ubiquitin-protein ligase UPL4.
   
 0.916
A0A096QLF3
E3 ubiquitin-protein ligase UPL3.
   
 0.915
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.