STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6EY64Sphingosine kinase 1. (511 aa)    
Predicted Functional Partners:
Pco149699b
Sphingosine-1-phosphate lyase.
   
 0.989
B4FSP4_MAIZE
Alkaline phytoceramidase (APHC).
    
 0.953
C0PIH5_MAIZE
Alkaline phytoceramidase (APHC).
    
 0.953
B4FEQ6_MAIZE
3-dehydrosphinganine reductase TSC10B.
     
 0.943
K7U3E5_MAIZE
3-dehydrosphinganine reductase TSC10B.
     
 0.943
Cl24314_1
Neutral ceramidase.
    
 0.935
A0A1D6PTB5
Sphinganine C4-monooxygenase 1; Belongs to the sterol desaturase family.
   
 0.931
B4FTV7_MAIZE
Sphinganine C4-monooxygenase 1; Belongs to the sterol desaturase family.
   
 0.931
B4FWT9_MAIZE
Sphinganine C4-monooxygenase 1; Belongs to the sterol desaturase family.
   
 0.931
K7U8Z9_MAIZE
Sphinganine C4-monooxygenase 1; Belongs to the sterol desaturase family.
   
 0.931
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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