STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si946043a11tRNA/rRNA methyltransferase (SpoU) family protein. (210 aa)    
Predicted Functional Partners:
Csu434
Protein Iojap-related mitochondrial.
   
 
 0.862
A0A1D6LBG3
Uncharacterized protein.
  
  
 0.803
A0A1D6NSS3
Ribosomal protein L29 family protein.
   
 
 0.800
B8A1J9_MAIZE
Ribosomal protein L29 family protein.
   
 
 0.800
C0P9C2_MAIZE
Short integuments 2 mitochondrial.
  
 
 0.762
A0A1D6HJB6
Uncharacterized protein.
  
 
 0.741
Si603005c07
Ribosomal protein L17 family protein; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.741
B4FZB4_MAIZE
50S ribosomal protein L17 chloroplastic; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.741
Cl915_1(521)
GTP-binding family protein.
   
 
 0.729
A0A1D6MF89
GTP binding.
   
 
 0.729
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.