STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cl23032_-2Nuclear pore complex protein NUP98A. (965 aa)    
Predicted Functional Partners:
IDP351
Seh1-like protein; Belongs to the WD repeat SEC13 family.
    
 0.991
B6UGZ9_MAIZE
Rae1-like protein.
   
 0.985
A0A1D6IXS6
Protein RAE1.
    
 0.984
A0A1D6EN44
Protein transport protein SEC13 homolog B; Belongs to the WD repeat SEC13 family.
    
 0.975
A0A1D6HWM8
Protein transport protein SEC13 homolog B; Belongs to the WD repeat SEC13 family.
    
 0.975
B6TMN3_MAIZE
SEC13 protein isoform 1; Belongs to the WD repeat SEC13 family.
    
 0.975
B6UBG2_MAIZE
Protein transport protein SEC13 homolog B; Belongs to the WD repeat SEC13 family.
    
 0.975
A0A1D6HXC3
Nuclear pore complex protein NUP54.
  
0.926
A0A1D6PJ52
Putative thaumatin domain family protein.
     
0.923
A0A1D6PPH2
Nuclear pore complex protein NUP107.
   
 0.921
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.