STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6F5S5Uncharacterized protein. (110 aa)    
Predicted Functional Partners:
A0A1D6PPH2
Nuclear pore complex protein NUP107.
   
 0.741
A0A1D6K500
Ribosomal protein L37.
    
 0.728
B6T4D2_MAIZE
Ribosomal protein L37; Binds to the 23S rRNA.
    
 0.728
IDP351
Seh1-like protein; Belongs to the WD repeat SEC13 family.
    
 0.672
Pco071008b
Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family.
    
 0.599
C0P2V4_MAIZE
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.599
A0A1D6EN44
Protein transport protein SEC13 homolog B; Belongs to the WD repeat SEC13 family.
    
 0.578
A0A1D6HWM8
Protein transport protein SEC13 homolog B; Belongs to the WD repeat SEC13 family.
    
 0.578
B6TMN3_MAIZE
SEC13 protein isoform 1; Belongs to the WD repeat SEC13 family.
    
 0.578
B6UBG2_MAIZE
Protein transport protein SEC13 homolog B; Belongs to the WD repeat SEC13 family.
    
 0.578
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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