STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6F6J2Uncharacterized protein. (81 aa)    
Predicted Functional Partners:
A0A1D6QSL7
OTU-like cysteine protease family protein.
   
 0.902
A0A1D6DU17
UBX domain-containing protein.
    
 0.841
A0A1D6JHM3
UBX domain-containing protein.
    
 0.841
Pco087010a
Protein OS-9-like protein.
    
 0.836
Pco087009
Protein OS-9-like protein.
    
 0.836
Pco129049
Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase.
    
 0.806
A0A1D6E917
Plant UBX domain-containing protein 4.
   
 0.801
IDP620
Plant UBX domain-containing protein 4.
   
 0.801
Pco100106
Plant UBX domain-containing protein 4.
   
 0.801
B4FU58_MAIZE
Ataxin-3-like protein.
    
 0.794
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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