STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6FC50Retrotransposon-like protein. (294 aa)    
Predicted Functional Partners:
A0A1D6LHB3
ATP-dependent DNA helicase; Belongs to the helicase family.
  
     0.486
A0A1D6P502
ATP-dependent DNA helicase; Belongs to the helicase family.
  
     0.485
A0A1D6NT98
Helitron_like_N domain-containing protein.
  
     0.481
A0A1D6KCJ8
Helitron_like_N domain-containing protein.
  
     0.477
A0A1D6F4W4
Helitron_like_N domain-containing protein.
  
     0.465
A0A1D6L1F7
Helitron_like_N domain-containing protein.
  
     0.463
A0A1D6L2K0
Helicase.
  
     0.462
A0A1D6PIV7
ATP-dependent DNA helicase; Belongs to the helicase family.
  
     0.461
A0A1D6J5K2
Helitron_like_N domain-containing protein.
  
     0.459
A0A1D6KND6
ATP-dependent DNA helicase; Belongs to the helicase family.
 
     0.457
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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