STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6FDV1Phytochrome A. (242 aa)    
Predicted Functional Partners:
A0A1D6HRS3
Phytochrome B.
 
    
 0.939
A0A1D6IYC8
Phytochrome B.
    
 
 0.888
A0A1Q0XTC6
Phytochrome B.
    
 
 0.888
A0A1D6MJ48
Gigantea2.
      
 0.850
B8A2L5_MAIZE
Cryptochrome2.
    
 
 0.838
K7TXG5_MAIZE
Cryptochrome 2.
    
 
 0.838
A0A1D6ELJ8
Cryptochrome-1.
    
 
 0.837
A0A1D6GYW3
Cryptochrome-1.
    
 
 0.837
A0A1D6H1Q2
Cryptochrome-1.
    
 
 0.837
Siu50817b
Cryptochrome-1.
    
 
 0.837
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (16%) [HD]