STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6FET0Nuclear pore complex protein NUP96. (104 aa)    
Predicted Functional Partners:
A0A1D6PPH2
Nuclear pore complex protein NUP107.
   
 0.913
A0A1D6HXC3
Nuclear pore complex protein NUP54.
   
 0.912
IDP351
Seh1-like protein; Belongs to the WD repeat SEC13 family.
    
 0.909
A0A1D6H0E6
SUPPRESSOR OF AUXIN RESISTANCE1.
   
 0.896
Si486016f12b
Nuclear pore complex protein NUP88.
    
 0.872
A0A1D6H3M4
Nuclear pore complex protein NUP205.
   
 0.861
A0A1D6MIE3
Replication protein A 14 kDa subunit B.
   
 0.861
Pco071008b
Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family.
   
 0.855
B6UGZ9_MAIZE
Rae1-like protein.
   
 0.855
C0P2V4_MAIZE
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.855
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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