STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6FH69tRNAse Z4. (998 aa)    
Predicted Functional Partners:
A0A1X7YE61
Uncharacterized protein.
   
   0.881
Umc1982
P-loop containing nucleoside triphosphate hydrolase superfamily protein.
   
   0.881
A0A1D6MAS1
Periodic tryptophan protein 2.
   
    0.764
A0A1D6FL68
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
    0.731
A0A1D6JNW9
Transducin family protein / WD-40 repeat family protein.
   
    0.727
Pco081178
Metallopeptidase M24 family protein.
     
 0.707
B4FXJ7_MAIZE
tRNA (adenine(58)-N(1))-methyltransferase.
  
  
 0.706
A0A1D6N3X2
Beta-Casp domain-containing protein.
     
 0.682
A0A1D6GTY7
Putative mitochondrial intermediate peptidase mitochondrial.
  
  
 0.676
A0A1D6HJ15
SAM-dependent MTase TRM10-type domain-containing protein.
   
 
 0.625
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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