STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6FIR2Tetratricopeptide repeat protein 5. (332 aa)    
Predicted Functional Partners:
Umc2770
GMP synthase [glutamine-hydrolyzing].
  
 
 0.851
A0A1D6ML85
Aspartate--tRNA ligase chloroplastic/mitochondrial.
  
 
 0.813
A0A1D6EBU9
Aspartate/glutamate/uridylate kinase family protein.
  
 
 0.778
A0A1D6G3Z5
Amino acid kinase family protein.
  
 
 0.778
Cl5001_1(636)
Amino acid kinase family protein.
  
 
 0.778
Pco090715
5S rRNA binding protein.
   
  
 0.744
A0A1D6JMR7
60S ribosomal protein L5-1.
   
 
 0.743
A0A1D6L548
60S ribosomal protein L13a-1.
   
 
 0.736
C0HFM4_MAIZE
60S ribosomal protein L13a-1.
   
 
 0.736
A0A1D6KRW8
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.722
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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