STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6FMJ9RNA-binding protein BRN1. (484 aa)    
Predicted Functional Partners:
A0A1D6GJK5
Protein CASP.
      
 0.668
A0A1D6N1C9
Uridine 5'-monophosphate synthase.
      
 0.667
A0A1D6EZR5
Putative MO25-like protein.
      
 0.660
A0A1D6I4Y9
Pectinesterase 31.
      
 0.660
A0A1D6JQ64
Calcium-binding protein 39.
      
 0.660
A0A1D6N7W7
Pectinesterase 31.
      
 0.660
A0A1D6PJ96
Pectinesterase 31.
      
 0.660
C0P797_MAIZE
Putative MO25-like protein.
      
 0.660
A0A1D6E8G4
Protein NBR1-like protein.
      
 0.596
C0PDQ4_MAIZE
Protein NBR1-like protein.
      
 0.596
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.