Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A1D6FSP6Pectin lyase-like superfamily protein; Belongs to the glycosyl hydrolase 28 family. (283 aa)    
Predicted Functional Partners:
A0A1D6F117
Tubulin gamma-2 chain.
      
 0.782
A0A1D6QRH0
Tubulin gamma-2 chain.
      
 0.782
TUBB1
Tubulin beta-1 chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain; Belongs to the tubulin family.
      
 0.781
A0A096SSY4
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
      
 0.639
A0A1D6LVT0
Beta-13-galactosyltransferase GALT1.
      
 0.620
A0A1D6MSE6
Beta 1, 3 galactosyltransferase.
      
 0.620
K7VQI1_MAIZE
Beta-13-galactosyltransferase GALT1.
      
 0.620
B6SZL3_MAIZE
Pectinesterase.
  
   
 0.564
A0A1D6FHT9
Pectinesterase.
  
   
 0.559
A0A1D6FHK6
Pectin lyase-like superfamily protein.
  
     0.533
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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