STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6FWU8Transducin family protein / WD-40 repeat family protein. (2449 aa)    
Predicted Functional Partners:
A0A1D6F2B0
Squamosa promoter-binding-like protein 14.
    
 
 0.797
A0A1D6GSX5
Squamosa promoter-binding-like protein 14.
    
 
 0.797
A0A1D6GSX9
Squamosa promoter-binding-like protein 8.
    
 
 0.797
A0A1D6LAD4
Squamosa promoter-binding-like protein 1.
    
 
 0.797
A0A1D6M2V4
Squamosa promoter-binding-like protein 14.
    
 
 0.797
A0A1D6NDQ3
Squamosa promoter-binding-like protein 14.
    
 
 0.797
A0A1D6NV24
Squamosa promoter-binding-like protein 14.
    
 
 0.797
K7UCC7_MAIZE
Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein.
    
 
 0.797
A0A1D6G843
V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
    
 
 0.792
Pco086635(414)
V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
    
 
 0.792
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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