STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6G6D0snRNA-activating protein complex subunit. (553 aa)    
Predicted Functional Partners:
A0A1D6FW75
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
    
  0.941
A0A1D6N0A5
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
    
  0.941
A0A1D6IU95
DNA-directed RNA polymerases II IV and V subunit 10.
    
 0.934
A0A1D6ELK2
DNA-directed RNA polymerases II IV and V subunit 3.
    
 0.930
A0A1D6M0J8
Transcription factor IIA alpha/beta subunit.
    
  0.917
K7V2B3_MAIZE
Transcription factor IIA alpha/beta subunit.
    
  0.917
A0A1D6FSW5
Transcription initiation factor IIF beta subunit.
    
  0.915
A0A1X7YH55
Uncharacterized protein.
    
  0.915
A0A1D6GSA3
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
  0.913
A0A1D6GUL6
DNA-directed RNA polymerases II IV and V subunit 8B.
    
 0.913
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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