STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6G865Uncharacterized protein. (479 aa)    
Predicted Functional Partners:
A0A1D6FVI5
Uncharacterized protein.
   
 
 0.505
Pco078604
Nucleolar protein NOP56-like protein.
   
 
 0.505
K7VIA0_MAIZE
Nucleolar protein NOP56-like protein.
   
 
 0.505
A0A1D6JM59
D111/G-patch domain-containing protein.
   
 
 0.489
C4J2Q3_MAIZE
Binding.
   
    0.469
B4FC44_MAIZE
RNA-binding (RRM/RBD/RNP motifs) family protein.
   
   0.447
A0A1D6DTS8
Mediator of RNA polymerase II transcription subunit 36a.
   
 
 0.441
A0A1D6GJM8
Mediator of RNA polymerase II transcription subunit 36a.
   
 
 0.441
A0A1D6GTM1
Mediator of RNA polymerase II transcription subunit 36a.
   
 
 0.441
A0A1D6LQV3
Mediator of RNA polymerase II transcription subunit 36a.
   
 
 0.441
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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