STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6G878Uncharacterized protein. (133 aa)    
Predicted Functional Partners:
A0A1D6MSD3
Ribosomal_S27 domain-containing protein.
   
 0.843
B6T7T6_MAIZE
40S ribosomal protein S27a.
   
 0.843
UBF9
Ubiquitin-40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is involve [...]
   
 0.843
A0A1D6L8S4
Ubiquitin-60S ribosomal protein L40.
    
  0.834
B6SHW9_MAIZE
Ubiquitin-60S ribosomal protein L40-1.
    
  0.834
A0A1D6ES07
Ubiquitin-like superfamily protein.
   
 0.612
A0A1D6G247
Ubiquitin-like superfamily protein.
   
 0.612
Pco108118f
Ubiquitin-NEDD8-like protein RUB1.
   
 0.612
A0A1D6LQK5
Ubiquitin3.
   
 0.612
B4FA90_MAIZE
Ubiquitin-like superfamily protein.
   
 0.612
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.