STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cl10085_1aUncharacterized protein. (168 aa)    
Predicted Functional Partners:
B4FVT8_MAIZE
Small subunit ribosomal protein 16.
   
   0.760
A0A1D6H4T8
Uncharacterized protein.
   
   0.748
B6TNB0_MAIZE
Mitochondrial 60S ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family.
   
   0.748
Magi94754
Decoy.
   
   0.747
Pco104142
Ribosomal protein L18e/L15 superfamily protein.
   
   0.741
K7V1S7_MAIZE
Uncharacterized protein.
   
   0.738
A0A1D6MFT1
Translation elongation factor EF1B/ribosomal protein S6 family protein.
   
   0.735
A0A1D6GXW0
Ribosomal protein S5 family protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.734
Pco148683
50S ribosomal protein L4.
   
   0.733
B6T337_MAIZE
Uncharacterized protein.
   
   0.731
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.